JAL-1264 reverted (removed added method)

[jalview.git] / resources / lang / Messages.properties

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index 8356ebf..b1962e0 100644 (file)
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -54,6 +54,7 @@ action.right_justify_alignment = Right Justify Alignment
 action.boxes = Boxes\r
 action.text = Text\r
 action.by_pairwise_id = by Pairwise Identity\r
+action.by_length = by Length\r
 action.by_id = by Id\r
 action.by_length = by Length\r
 action.by_group = by Group\r
@@ -165,6 +166,15 @@ label.redo_command = Redo {0}
 label.principal_component_analysis = Principal Component Analysis\r
 label.average_distance_identity = Average Distance Using % Identity\r
 label.neighbour_joining_identity = Neighbour Joining Using % Identity\r
+label.treecalc_title = {0} Using {1}\r
+label.tree_calc_av = Average Distance\r
+label.tree_calc_nj = Neighbour Joining\r
+label.select_score_model = Select score model\r
+label.score_model_pid = % Identity\r
+label.score_model_blosum62 = BLOSUM62\r
+label.score_model_pam250 = PAM 250\r
+label.score_model_conservation = Physicochemical property conservation\r
+label.score_model_enhconservation = Physicochemical property conservation\r
 label.status_bar = Status bar\r
 label.out_to_textbox = Output to Textbox\r
 label.clustalx = Clustalx\r
@@ -190,6 +200,9 @@ label.tcoffee_scores = T-Coffee Scores
 label.average_distance_bloslum62 = Average Distance Using BLOSUM62\r
 label.neighbour_blosum62 = Neighbour Joining Using BLOSUM62\r
 label.show_annotations = Show annotations\r
+label.hide_annotations = Hide annotations\r
+label.show_all_annotations = Show all annotations\r
+label.hide_all_annotations = Hide all annotations\r
 label.colour_text = Colour Text\r
 label.show_non_conversed = Show nonconserved\r
 label.overview_window = Overview Window\r
@@ -214,6 +227,7 @@ label.all_columns = All Columns
 label.all_sequences = All Sequences\r
 label.selected_columns = Selected Columns \r
 label.selected_sequences = Selected Sequences\r
+label.except_selected_sequences = All except selected sequences\r
 label.all_but_selected_region = All but Selected Region (Shift+Ctrl+H)\r
 label.selected_region = Selected Region\r
 label.all_sequences_columns = All Sequences and Columns\r
@@ -454,9 +468,8 @@ label.jalview_cut = Cut (Jalview Only)
 label.to_upper_case = To Upper Case\r
 label.to_lower_case = To Lower Case\r
 label.toggle_case = Toggle Case\r
-label.edit_name_description = Edit Name/Description\r
-label.create_sequence_feature = Create Sequence Feature\r
-label.edit_sequence = Edit Sequence\r
+label.edit_name_description = Edit Name/Description ...\r
+label.create_sequence_feature = Create Sequence Feature ...\r
 label.edit_sequences = Edit Sequences\r
 label.sequence_details = Sequence Details\r
 label.jmol_help = Jmol Help\r
@@ -620,7 +633,7 @@ label.edit_name_and_description_current_group = Edit name and description of cur
 label.view_structure_for = View structure for {0}\r
 label.view_all_structures = View all {0} structures.\r
 label.view_all_representative_structures = View all {0} representative structures.\r
-label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = "Opens a new Jmol view with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment."\r
+label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Opens a new Jmol view with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment.\r
 label.associate_structure_with_sequence = Associate Structure with Sequence\r
 label.from_file = from file\r
 label.enter_pdb_id = Enter PDB Id\r
@@ -676,7 +689,6 @@ label.case_sensitive = Case Sensitive
 label.lower_case_colour = Lower Case Colour\r
 label.index_by_host = Index by host\r
 label.index_by_type = Index by type\r
-label.enable_enfin_services = Enable Enfin Services\r
 label.enable_jabaws_services = Enable JABAWS Services\r
 label.display_warnings = Display warnings\r
 label.move_url_up = Move URL up\r
@@ -730,3 +742,13 @@ label.select_columns_containing = Select columns containing
 label.select_columns_not_containing = Select columns that do not contain\r
 option.trim_retrieved_seqs = Trim retrieved sequences\r
 label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences.\r
+label.choose_annotations = Choose annotations to show or hide\r
+label.show_selected_annotations = Show selected annotation types\r
+label.hide_selected_annotations = Hide selected annotation types\r
+label.add_reference_annotations = Add reference annotations\r
+label.find = Find\r
+error.invalid_regex = Invalid regular expression\r
+label.invalid_search = Search string invalid\r
+label.find_tip = <html>Search alignment, selection or sequence ids for a subsequence (ignoring gaps).<br>Accepts regular expressions - search Help for 'regex' for details.\r
+label.delete_all = Delete all sequences\r
+warn.delete_all = <html>Deleting all sequences will close the alignment window.<br>Confirm deletion or Cancel.\r