label.show_sequence_features = Show Sequence Features
label.nucleotide = Nucleotide
label.protein = Protein
+label.nucleotides = Nucleotides
+label.proteins = Proteins
label.to_new_alignment = To New Alignment
label.to_this_alignment = Add To This Alignment
label.apply_colour_to_all_groups = Apply Colour To All Groups
label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Opens a new structure viewer with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment.
label.associate_structure_with_sequence = Associate Structure with Sequence
label.from_file = From File
-label.enter_pdb_id = Enter PDB Id
+label.enter_pdb_id = Enter PDB Id (or pdbid:chaincode)
label.discover_pdb_ids = Discover PDB IDs
label.text_colour = Text Colour
action.set_text_colour = Text Colour...
label.export_image = Export Image
label.vamsas_store = VAMSAS store
label.translate_cDNA = Translate as cDNA
-label.linked_view_title = Linked cDNA and protein view
+label.reverse = Reverse
+label.reverse_complement = Reverse Complement
+label.linked_view_title = Linked CDS and protein view
label.align = Align
label.extract_scores = Extract Scores
label.get_cross_refs = Get Cross-References
label.graduated_color_for_params = Graduated Feature Colour for {0}
label.select_backgroud_colour = Select Background Colour
label.invalid_font = Invalid Font
-label.separate_multiple_accession_ids = Enter one or more PDB accession IDs separated by a semi-colon ";"
+label.separate_multiple_accession_ids = Enter one or more accession IDs separated by a semi-colon ";"
label.separate_multiple_query_values = Enter one or more {0}s separated by a semi-colon ";"
-label.search_all = Enter one or more search values separated by a semi-colon ";" (Note: This Searches the entire PDB database)
+label.search_all = Enter one or more search values separated by a semi-colon ";" (Note: This Searches the entire database)
label.replace_commas_semicolons = Replace commas with semi-colons
label.parsing_failed_syntax_errors_shown_below_param = Parsing failed. Syntax errors shown below {0}
label.parsing_failed_unrecoverable_exception_thrown_param = \nParsing failed. An unrecoverable exception was thrown\:\n {0}
label.blasting_for_unidentified_sequence = BLASTing for unidentified sequences
label.select_columns_containing = Select columns containing
label.select_columns_not_containing = Select columns that do not contain
+label.hide_columns_containing = Hide columns containing
+label.hide_columns_not_containing = Hide columns that do not contain
option.trim_retrieved_seqs = Trim retrieved sequences
label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences.
label.use_sequence_id_1 = Use $SEQUENCE_ID$ or $SEQUENCE_ID=/<regex>/=$
error.png_generation_not_implemented = PNG Generation not yet implemented
error.try_join_vamsas_session_another = Trying to join a vamsas session when another is already connected
error.invalid_vamsas_session_id = Invalid vamsas session id
-error.implementation_error_cannot_create_groovyshell = Implementation Error. Cannot create groovyShell without Groovy on the classpath!
label.groovy_support_failed = Jalview Groovy Support Failed
label.couldnt_create_groovy_shell = Couldn't create the groovy Shell. Check the error log for the details of what went wrong.
error.unsupported_version_calcIdparam = Unsupported Version for calcIdparam {0}
error.dbrefsource_implementation_exception =DBRefSource Implementation Exception
error.implementation_error_dbinstance_must_implement_interface = Implmentation Error - getDbInstances must be given a class that implements jalview.ws.seqfetcher.DbSourceProxy (was given{0})
error.implementation_error_must_init_dbsources =Implementation error. Must initialise dbSources
-label.view_controller_toggled_marked = {0} {1} columns {2} containing features of type {3} across {4} sequence(s)
+label.view_controller_toggled_marked = {0} {1} columns containing features of type {2} across {3} sequence(s)
label.toggled = Toggled
label.marked = Marked
label.not = not
label.eps_file = EPS file
label.png_image = PNG image
status.saving_file = Saving {0}
-status.export_complete = Export complete.
+status.export_complete = {0} Export completed.
status.fetching_pdb = Fetching PDB {0}
status.refreshing_news = Refreshing news
status.importing_vamsas_session_from = Importing VAMSAS session from {0}
label.open_split_window? = Would you like to open as a split window, with cDNA and protein linked?
label.open_split_window = Open split window
label.no_mappings = No mappings found
-label.mapping_failed = No sequence mapping could be made between the alignments.<br>A mapping requires sequence names to match, and equivalent sequence lengths.
action.no = No
action.yes = Yes
label.for = for
label.mark_as_representative = Mark as representative
label.open_jabaws_web_page = Open JABAWS web page
label.opens_the_jabaws_server_homepage = Opens the JABAWS server's homepage in web browser
-label.pdb_sequence_getcher = PDB Sequence Fetcher
+label.pdb_sequence_fetcher = PDB Sequence Fetcher
label.result = result
label.results = results
label.structure_chooser = Structure Chooser
info.associate_wit_sequence = Associate with Sequence
label.search_result = Search Result
label.found_structures_summary = Found Structures Summary
-label.configure_displayed_columns = Configure Displayed Columns
+label.configure_displayed_columns = Customise Displayed Options
label.start_jalview = Start Jalview
label.biojs_html_export = BioJS
label.scale_as_cdna = Scale protein residues to codons
label.structure_chooser_no_of_structures = Structure Chooser - {0} Found ({1})
info.no_pdb_entry_found_for = No PDB entry found for {0}
exception.unable_to_detect_internet_connection = Jalview is unable to detect an internet connection
-exception.pdb_rest_service_no_longer_available = PDB rest services no longer available!
+exception.fts_rest_service_no_longer_available = {0} rest services no longer available!
exception.resource_not_be_found = The requested resource could not be found
-exception.pdb_server_error = There seems to be an error from the PDB server
-exception.pdb_server_unreachable = Jalview is unable to reach the PDBe Solr server. \nPlease ensure that you are connected to the internet and try again.
+exception.fts_server_error = There seems to be an error from the {0} server
+exception.fts_server_unreachable = Jalview is unable to reach the {0} server. \nPlease ensure that you are connected to the internet and try again.
+label.nw_mapping = Needleman & Wunsch Alignment
+label.sifts_mapping = SIFTs Mapping
+label.mapping_method = Sequence \u27f7 Structure mapping method
+status.waiting_for_user_to_select_output_file = Waiting for user to select {0} file
+status.cancelled_image_export_operation = Cancelled {0} export operation
+info.error_creating_file = Error creating {0} file
+exception.outofmemory_loading_mmcif_file = Out of memory loading mmCIF File
+label.run_groovy = Run Groovy console script
+label.run_groovy_tip = Run the script in the Groovy console over this alignment
+label.couldnt_run_groovy_script = Failed to run Groovy script
+label.uniprot_sequence_fetcher = UniProt Sequence Fetcher
+action.next_page= >>
+action.prev_page= <<
+label.next_page_tooltip=Next Page
+label.prev_page_tooltip=Previous Page
+exception.bad_request=Bad request. There is a problem with your input.
+exception.service_not_available=Service not available. The server is being updated, try again later.
+status.launching_3d_structure_viewer = Launching 3D Structure viewer...
+status.fetching_3d_structures_for_selected_entries = Fetching 3D Structures for selected entries...
+status.fetching_dbrefs_for_sequences_without_valid_refs = Fetching db refs for {0} sequence(s) without valid db ref required for SIFTS mapping
+status.fetching_3d_structures_for = Fetching 3D Structure for {0}
+status.obtaining_mapping_with_sifts = Obtaining mapping with SIFTS
+status.obtaining_mapping_with_nw_alignment = Obtaining mapping with NW alignment
+status.exporting_alignment_as_x_file = Exporting alignment as {0} file
+label.column = Column
+label.sequence = Sequence
git://source.jalview.org / jalview.git / blobdiff