ScoreMatrix BLOSUM62
-ARNDCQEGHILKMFPSTWYVBZX-*
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# The BLOSUM62 substitution matrix, as at https://www.ncbi.nlm.nih.gov/Class/FieldGuide/BLOSUM62.txt
# The first line declares a ScoreMatrix with the name BLOSUM62 (shown in menus)
# Values may be integer or floating point, delimited by tab, space, comma or combinations
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A R N D C Q E G H I L K M F P S T W Y V B Z X - *
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A 4 -1 -2 -2 0 -1 -1 0 -2 -1 -1 -1 -1 -2 -1 1 0 -3 -2 0 -2 -1 0 -4 -4
R -1 5 0 -2 -3 1 0 -2 0 -3 -2 2 -1 -3 -2 -1 -1 -3 -2 -3 -1 0 -1 -4 -4
N -2 0 6 1 -3 0 0 0 1 -3 -3 0 -2 -3 -2 1 0 -4 -2 -3 3 0 -1 -4 -4