viewId will appear for each instance.</xs:documentation>
</xs:annotation>
</xs:attribute>
+ <xs:attribute name="linkAlignPanel" type="xs:boolean" use="optional" default="true">
+ <xs:annotation>
+ <xs:documentation>
+ Flag set if the alignment panel containing this JSeq should be explicitly linked to the Jmol view referred to/created by this structureState (since Jalview 2.7).
+ </xs:documentation>
+ </xs:annotation>
+ </xs:attribute>
+ <xs:attribute name="alignwithAlignPanel" type="xs:boolean" use="optional" default="true">
+ <xs:annotation>
+ <xs:documentation>
+ Flag set if the alignment panel containing this JSeq should be included in those used to perform a structure superposition (since Jalview 2.7).
+ </xs:documentation>
+ </xs:annotation>
+ </xs:attribute>
</xs:extension>