copy only the sequence associated alignment annotation displayed in the current view

[jalview.git] / src / MCview / PDBCanvas.java

diff --git a/src/MCview/PDBCanvas.java b/src/MCview/PDBCanvas.java
index d38aa2a..a5c0e70 100755 (executable)
--- a/src/MCview/PDBCanvas.java
+++ b/src/MCview/PDBCanvas.java
@@ -512,12 +512,15 @@ public class PDBCanvas
   {
     // System.out.println("colour by seq");
     boolean showFeatures = false;
-    if (seqcanvas.getViewport().getShowSequenceFeatures())
+
+ //NO LONGER USED SINCE APPJMOL
+// if (seqcanvas.getViewport().getShowSequenceFeatures())
     {
       showFeatures = true;
       if (fr == null)
       {
-        fr = new jalview.gui.FeatureRenderer(seqcanvas.getViewport());
+    //NO LONGER USED SINCE APPJMOL
+//    fr = new jalview.gui.FeatureRenderer(seqcanvas.getViewport());
       }
 
       fr.transferSettings(seqcanvas.getFeatureRenderer());