Merge branch 'JAL-1347' into develop

[jalview.git] / src / MCview / PDBViewer.java

diff --git a/src/MCview/PDBViewer.java b/src/MCview/PDBViewer.java
index 2ba8c56..ccf68bb 100755 (executable)
--- a/src/MCview/PDBViewer.java
+++ b/src/MCview/PDBViewer.java
@@ -21,6 +21,14 @@ import java.io.*;
 
 import java.awt.event.*;
 import javax.swing.*;
+import javax.xml.parsers.ParserConfigurationException;
+
+import org.xml.sax.SAXException;
+
+import fr.orsay.lri.varna.exceptions.ExceptionFileFormatOrSyntax;
+import fr.orsay.lri.varna.exceptions.ExceptionLoadingFailed;
+import fr.orsay.lri.varna.exceptions.ExceptionPermissionDenied;
+import fr.orsay.lri.varna.exceptions.ExceptionUnmatchedClosingParentheses;
 
 import jalview.datamodel.*;
 import jalview.gui.*;
@@ -50,7 +58,6 @@ public class PDBViewer extends JInternalFrame implements Runnable
 
   public PDBViewer(PDBEntry pdbentry, SequenceI[] seq, String[] chains,
           AlignmentPanel ap, String protocol)
-
   {
     this.pdbentry = pdbentry;
     this.seq = seq;
@@ -683,6 +690,7 @@ public class PDBViewer extends JInternalFrame implements Runnable
           }
         }
         out.close();
+        in.close();
       } catch (Exception ex)
       {
         ex.printStackTrace();