JAL-3190 rough Proof of Concept of JalviewJS - Chimera

[jalview.git] / src / ext / edu / ucsf / rbvi / strucviz2 / port / ListenerThreads.java

diff --git a/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java b/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java
index 379097c..b08a919 100644 (file)
--- a/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java
+++ b/src/ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.java
@@ -41,8 +41,10 @@ import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
 
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
+import ext.edu.ucsf.rbvi.strucviz2.Logger;
+
+//import org.slf4j.Logger;
+//import org.slf4j.LoggerFactory;
 
 import ext.edu.ucsf.rbvi.strucviz2.StructureManager;
 
@@ -61,7 +63,7 @@ public class ListenerThreads extends Thread
 
   private Map<String, List<String>> replyLog = null;
 
-  private Logger logger;
+  private Logger logger = new Logger();
 
   private StructureManager structureManager = null;
 
@@ -83,8 +85,8 @@ public class ListenerThreads extends Thread
     // Get a line-oriented reader
     InputStream readChan = chimera.getInputStream();
     lineReader = new BufferedReader(new InputStreamReader(readChan));
-    logger = LoggerFactory
-            .getLogger(ext.edu.ucsf.rbvi.strucviz2.port.ListenerThreads.class);
+    logger =new Logger();
+    //LoggerFactory.getLogger(ext.edu.ucsf.rbvi.strucviz2.port.ListenerThreads.class);
   }
 
   /**