*/
package jalview.analysis;
-import java.util.ArrayList;
-import java.util.Arrays;
-import java.util.Comparator;
-import java.util.List;
-import java.util.Map;
-
import jalview.api.AlignViewportI;
import jalview.datamodel.AlignedCodon;
import jalview.datamodel.AlignedCodonFrame;
import jalview.util.MapList;
import jalview.util.ShiftList;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.Comparator;
+import java.util.List;
+import java.util.Map;
+
public class Dna
{
- private static final String STOP_X = "X";
+ private static final String STOP_ASTERIX = "*";
private static final Comparator<AlignedCodon> comparator = new CodonComparator();
}
if (aa.equals("STOP"))
{
- aa = STOP_X;
+ aa = STOP_ASTERIX;
}
resSize++;
}