Sends gapChar to seqData

[jalview.git] / src / jalview / analysis / NJTree.java

diff --git a/src/jalview/analysis/NJTree.java b/src/jalview/analysis/NJTree.java
index 98916e3..974175f 100755 (executable)
--- a/src/jalview/analysis/NJTree.java
+++ b/src/jalview/analysis/NJTree.java
@@ -1018,13 +1018,13 @@ public class NJTree
      *\r
      * @return null or cut'n'pasteable alignment\r
      */\r
-    public String printOriginalSequenceData()\r
+    public String printOriginalSequenceData(char gapChar)\r
     {\r
       if (seqData==null)\r
         return null;\r
-//      return seqData.getSequenceString(Comparison.GapChars[0]);\r
+\r
       StringBuffer sb = new StringBuffer();\r
-      String[] seqdatas = seqData.getSequenceStrings(Comparison.GapChars.charAt(0));\r
+      String[] seqdatas = seqData.getSequenceStrings(gapChar);\r
       for(int i=0; i<seqdatas.length; i++)\r
       {\r
         sb.append(new jalview.util.Format("%-" + 15 + "s").form(\r