apply version 2.7 copyright

[jalview.git] / src / jalview / analysis / PCA.java

diff --git a/src/jalview/analysis/PCA.java b/src/jalview/analysis/PCA.java
index c74279b..ff4ed38 100755 (executable)
--- a/src/jalview/analysis/PCA.java
+++ b/src/jalview/analysis/PCA.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
  * 
  * This file is part of Jalview.
  * 
@@ -241,12 +241,15 @@ public class PCA implements Runnable
     eigenvector.tqli();
 
     details.append(" --- New diagonalization matrix ---\n");
+    eigenvector.print(ps);
     details.append(" --- Eigenvalues ---\n");
     eigenvector.printD(ps);
     ps.println();
-    // taps.println();
-    // taps.println("Transformed sequences = ");
-    // Matrix trans = m.preMultiply(eigenvector);
-    // trans.print(System.out);
+    /*
+     * for (int seq=0;seq<symm.rows;seq++) { ps.print("\"Seq"+seq+"\""); for
+     * (int ev=0;ev<symm.rows; ev++) {
+     * 
+     * ps.print(","+component(seq, ev)); } ps.println(); }
+     */
   }
 }