JAL-580 ensure WUSS annotation is reparsed if necessary and cope with parse errors

[jalview.git] / src / jalview / analysis / Rna.java

diff --git a/src/jalview/analysis/Rna.java b/src/jalview/analysis/Rna.java
index 66bccb9..ca3c6d5 100644 (file)
--- a/src/jalview/analysis/Rna.java
+++ b/src/jalview/analysis/Rna.java
@@ -44,6 +44,7 @@ public class Rna
    *         pair, end is close base pair
    */
   public static SequenceFeature[] GetBasePairs(String line)
+  public static SequenceFeature[] GetBasePairs(CharSequence line) throws WUSSParseException
   {
 
     Vector stack = new Vector();