/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
* Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
sqinfo.put("SeqFeatures", sfeat);
sqinfo.put("PdbId", (seq.getPDBId() != null) ? seq.getPDBId()
: new Vector());
- sqinfo.put("datasetSequence", (seq.getDatasetSequence() != null) ? seq
- .getDatasetSequence() : new Sequence("THISISAPLACEHOLDER", ""));
+ sqinfo.put("datasetSequence",
+ (seq.getDatasetSequence() != null) ? seq.getDatasetSequence()
+ : new Sequence("THISISAPLACEHOLDER", ""));
return sqinfo;
}
for (int i = 0, j = sequences.length; i < j; i++)
{
String tempseq = jalview.analysis.AlignSeq.extractGaps(
- jalview.util.Comparison.GapChars, sequences[i]
- .getSequenceAsString());
+ jalview.util.Comparison.GapChars,
+ sequences[i].getSequenceAsString());
if (tempseq.length() == 0)
{