JAL-1517 source formatting

[jalview.git] / src / jalview / analysis / StructureFrequency.java

diff --git a/src/jalview/analysis/StructureFrequency.java b/src/jalview/analysis/StructureFrequency.java
index 4e487ff..dc0212e 100644 (file)
--- a/src/jalview/analysis/StructureFrequency.java
+++ b/src/jalview/analysis/StructureFrequency.java
@@ -6,17 +6,18 @@
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
-
 package jalview.analysis;
 
 import java.util.*;
@@ -346,18 +347,19 @@ public class StructureFrequency
       // initialised properly
       return;
     }
-    String fmtstr="%3.1f";
-    int precision=2;
-    while (nseq>100) {
+    String fmtstr = "%3.1f";
+    int precision = 2;
+    while (nseq > 100)
+    {
       precision++;
-      nseq/=10;
+      nseq /= 10;
     }
-    if (precision>2)
+    if (precision > 2)
     {
-      fmtstr = "%"+(2+precision)+"."+precision+"f";
+      fmtstr = "%" + (2 + precision) + "." + precision + "f";
     }
     Format fmt = new Format(fmtstr);
-    
+
     for (int i = iStart; i < width; i++)
     {
       Hashtable hci;
@@ -434,7 +436,8 @@ public class StructureFrequency
             tval = (vl[c] * 100f / profile[1][ignoreGapsInConsensusCalculation ? 1
                     : 0]);
             mouseOver += ((p == 0) ? "" : "; ") + (char) ((int[]) ca[c])[0]
-                    + (char) ((int[]) ca[c])[1] + " " + fmt.form(tval) + "%";
+                    + (char) ((int[]) ca[c])[1] + " " + fmt.form(tval)
+                    + "%";
             p++;
 
           }