JAL-2795 Reverted code changes needed to cluster from Forester

[jalview.git] / src / jalview / analysis / TreeBuilder.java

diff --git a/src/jalview/analysis/TreeBuilder.java b/src/jalview/analysis/TreeBuilder.java
index 30b83b3..0cd340e 100644 (file)
--- a/src/jalview/analysis/TreeBuilder.java
+++ b/src/jalview/analysis/TreeBuilder.java
@@ -53,8 +53,6 @@ public abstract class TreeBuilder
 
   protected MatrixI distances;
 
-  public MatrixI testDistances;
-
   protected int mini;
 
   protected int minj;
@@ -305,8 +303,8 @@ public abstract class TreeBuilder
     this.scoreModel = sm;
     this.scoreParams = scoreOptions;
 
-    testDistances = scoreModel.findDistances(seqData, scoreParams);
     distances = scoreModel.findDistances(seqData, scoreParams);
+
     makeLeaves();
 
     noClus = clusters.size();