Merge branch 'develop' into features/JAL-250_hideredundantseqs

[jalview.git] / src / jalview / api / AlignViewControllerI.java

diff --git a/src/jalview/api/AlignViewControllerI.java b/src/jalview/api/AlignViewControllerI.java
index a7ec69e..04c1fd9 100644 (file)
--- a/src/jalview/api/AlignViewControllerI.java
+++ b/src/jalview/api/AlignViewControllerI.java
@@ -20,6 +20,7 @@
  */
 package jalview.api;
 
+import jalview.datamodel.SequenceGroup;
 import jalview.io.DataSourceType;
 
 import java.util.List;
@@ -100,6 +101,14 @@ public interface AlignViewControllerI
           boolean relaxedIdMatching);
 
   /**
+   * clear any group definitions in the current view and add a set of new group
+   * definitions with randomly generated colours
+   * 
+   * @param gps
+   */
+  void showRandomColoursForGroups(List<SequenceGroup> gps);
+
+  /**
    * mark columns containing highlighted regions (e.g. from search, structure
    * highlight, or a mouse over event in another viewer)
    *