boolean markColumnsContainingFeatures(boolean invert,
boolean extendCurrent, boolean clearColumns, String featureType);
+ /**
+ * sort the alignment or current selection by average score over the given set of features
+ * @param typ list of feature names or null to use currently displayed features
+ */
+ void sortAlignmentByFeatureScore(String[] typ);
+
+ /**
+ * sort the alignment or current selection by distribution of the given set of features
+ * @param typ list of feature names or null to use currently displayed features
+ */
+ void sortAlignmentByFeatureDensity(String[] typ);
+
}