JAL-1114 - refactor methods handling Vectors and Hashtables to Lists and Maps, and...
[jalview.git] / src / jalview / api / AlignViewportI.java
index 6688e27..ab9efb1 100644 (file)
@@ -4,10 +4,14 @@
 package jalview.api;
 
 import java.util.Hashtable;
+import java.util.Map;
 
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AlignmentI;
+import jalview.datamodel.AnnotatedCollectionI;
 import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.SequenceCollectionI;
+import jalview.datamodel.SequenceI;
 import jalview.schemes.ColourSchemeI;
 import jalview.schemes.RNAHelicesColour;
 
@@ -100,4 +104,9 @@ public interface AlignViewportI
    */
   void setGlobalColourScheme(ColourSchemeI rhc);
 
+  Map<SequenceI, SequenceCollectionI> getHiddenRepSequences();
+
+  void setHiddenRepSequences(
+          Map<SequenceI, SequenceCollectionI> hiddenRepSequences);
+
 }