/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*/
package jalview.api;
+import jalview.datamodel.SequenceGroup;
import jalview.datamodel.SequenceI;
+import jalview.renderer.seqfeatures.FeatureColourFinder;
import java.awt.Color;
+import java.awt.Graphics;
public interface SequenceRenderer
{
- Color getResidueBoxColour(SequenceI sequenceI, int r);
+ Color getResidueColour(SequenceI seq, int position,
+ FeatureColourFinder finder);
+
+ /**
+ * Configure the Graphics canvas and render options for the renderer
+ * @param g - the canvas to render to
+ * @param renderGaps - when true, gap characters will be included when rendered
+ *
+ */
+ void prepare(Graphics g, boolean renderGaps);
+
+ void drawSequence(SequenceI nextSeq, SequenceGroup[] findAllGroups,
+ int startRes, int endRes, int i);
+
+ void drawHighlightedText(SequenceI nextSeq, int i, int j, int k, int l);
+
+ void drawCursor(Graphics g, char s, int i, int j);
}