JAL-4102 update date and release notes for 2.11.2.6

[jalview.git] / src / jalview / api / analysis / PairwiseScoreModelI.java

diff --git a/src/jalview/api/analysis/PairwiseScoreModelI.java b/src/jalview/api/analysis/PairwiseScoreModelI.java
index 241348c..5801a96 100644 (file)
--- a/src/jalview/api/analysis/PairwiseScoreModelI.java
+++ b/src/jalview/api/analysis/PairwiseScoreModelI.java
@@ -1,3 +1,23 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.api.analysis;
 
 /**
@@ -17,26 +37,6 @@ public interface PairwiseScoreModelI
    * @return
    */
   abstract public float getPairwiseScore(char c, char d);
-
-  /**
-   * Returns a readable name for the model, suitable for display in menus
-   * 
-   * @return
-   */
-  String getName();
-
-  /**
-   * Answers true if the model is applicable to nucleotide data
-   * 
-   * @return
-   */
-  boolean isDNA();
-
-  /**
-   * Answers true if the model is applicable to peptide data
-   * 
-   * @return
-   */
-  boolean isProtein();
+  // TODO make this static when Java 8
 
 }