/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*/
package jalview.api.structures;
-import jalview.api.FeatureRenderer;
-import jalview.api.SequenceRenderer;
-import jalview.api.SequenceStructureBinding;
-import jalview.datamodel.AlignmentI;
-import jalview.datamodel.SequenceI;
-import jalview.ext.jmol.JalviewJmolBinding;
import jalview.schemes.ColourSchemeI;
-import jalview.schemes.UserColourScheme;
-import jalview.structure.StructureMappingcommandSet;
-import jalview.structure.StructureSelectionManager;
+import jalview.structures.models.AAStructureBindingModel;
public interface JalviewStructureDisplayI
{
- SequenceStructureBinding getBinding();
+ AAStructureBindingModel getBinding();
/**
* @return true if there is an active GUI handling a structure display
void dispose();
/**
- * shutdown any structure viewing processes started by this display
+ * Shutdown any Jalview structure viewing processes started by this display
+ *
+ * @param closeExternalViewer
+ * if true, force close any linked external viewer process
*/
- void closeViewer();
+ void closeViewer(boolean closeExternalViewer);
+
/**
* apply a colourscheme to the structures in the viewer
+ *
* @param colourScheme
*/
void setJalviewColourScheme(ColourSchemeI colourScheme);