jalview.bin.JalviewLite.addFrame(frame, MessageManager.formatMessage(
"label.alignment_output_command", new Object[]
{ e.getActionCommand() }), 600, 500);
- cap.setText(new AppletFormatAdapter().formatSequences(
+
+ FeatureRenderer fr = this.alignPanel.cloneFeatureRenderer();
+ viewport.setFeatureRenderer(fr);
+ viewport.setIncludeHiddenRegion(false);
+ cap.setText(new AppletFormatAdapter(viewport).formatSequences(
e.getActionCommand(), viewport.getAlignment(),
viewport.getShowJVSuffix()));
}
@Override
public void setShowSeqFeatures(boolean b)
{
- // showSeqFeatures.setSelected(b);
- // viewport.setShowSequenceFeatures(b);
-
+ this.sequenceFeatures.setState(b);
+ viewport.setShowSequenceFeatures(b);
}
@Override