Must check consensus length if autocalculate off

[jalview.git] / src / jalview / appletgui / AlignFrame.java

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 7a0052f..6b79018 100755 (executable)
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -931,6 +931,11 @@ public void itemStateChanged(ItemEvent evt)
 \r
   public void deselectAllSequenceMenuItem_actionPerformed()\r
   {\r
+    if(viewport.cursorMode)\r
+    {\r
+      alignPanel.seqPanel.keyboardNo1=null;\r
+      alignPanel.seqPanel.keyboardNo2=null;\r
+    }\r
     viewport.setSelectionGroup(null);\r
     viewport.getColumnSelection().clear();\r
     viewport.setSelectionGroup(null);\r