seq.findPosition(sg.getStartRes()) + "\t"\r
+ seq.findPosition(sg.getEndRes()) + "\t"\r
+\r
- sg.getSequenceAt(i).getSequence(sg.getStartRes(),\r
+ seq.getSequence(sg.getStartRes(),\r
sg.getEndRes() + 1) + "\n");\r
}\r
\r
\r
int start=0, end = viewport.alignment.getWidth();\r
\r
- if(viewport.getSelectionGroup()!=null)\r
+ if (viewport.getSelectionGroup() != null\r
+ && viewport.getSelectionGroup().sequences != null\r
+ && viewport.getSelectionGroup().sequences.size()>0)\r
{\r
seqs = viewport.getSelectionGroup().sequences;\r
start = viewport.getSelectionGroup().getStartRes();\r