/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
* Copyright (C) 2014 The Jalview Authors
*
* This file is part of Jalview.
*/
package jalview.appletgui;
-import java.util.*;
-
-import java.awt.*;
-
-import jalview.analysis.*;
+import jalview.analysis.NJTree;
import jalview.api.AlignViewportI;
-import jalview.bin.*;
-import jalview.datamodel.*;
-import jalview.schemes.*;
+import jalview.bin.JalviewLite;
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.Sequence;
+import jalview.datamodel.SequenceGroup;
+import jalview.datamodel.SequenceI;
+import jalview.schemes.ColourSchemeProperty;
+import jalview.schemes.UserColourScheme;
import jalview.structure.SelectionSource;
import jalview.structure.VamsasSource;
import jalview.viewmodel.AlignmentViewport;
+import java.awt.Font;
+import java.util.Stack;
+
public class AlignViewport extends AlignmentViewport implements
AlignViewportI, SelectionSource, VamsasSource
{
Stack redoList = new Stack();
+ private AnnotationColumnChooser annotationColumnSelectionState;
+
public void finalize()
{
applet = null;
}
}
- @Override
- public boolean hasHiddenColumns()
- {
- return hasHiddenColumns;
- }
-
public boolean isNormaliseSequenceLogo()
{
return normaliseSequenceLogo;
return validCharWidth;
}
+ public AnnotationColumnChooser getAnnotationColumnSelectionState()
+ {
+ return annotationColumnSelectionState;
+ }
+
+ public void setAnnotationColumnSelectionState(
+ AnnotationColumnChooser annotationColumnSelectionState)
+ {
+ this.annotationColumnSelectionState = annotationColumnSelectionState;
+ }
+
}