/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
+ * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
*
* This program is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
upperCasebold = true;
}
}
+ param = applet.getParameter("sortByTree");
+ if (param != null)
+ {
+ sortByTree=Boolean.valueOf(param).booleanValue();
+ }
}
public boolean showUnconserved=false;
/**
+ * when set, alignment should be reordered according to a newly opened tree
+ */
+ public boolean sortByTree=false;
+
+ /**
* @return the showUnconserved
*/
public boolean getShowunconserved()