alignment = al;
// we always pad gaps
this.setPadGaps(true);
- this.startRes = 0;
- this.endRes = al.getWidth() - 1;
- this.startSeq = 0;
- this.endSeq = al.getHeight() - 1;
+ this.setStartRes(0);
+ this.setEndRes(al.getWidth() - 1);
+ this.setStartSeq(0);
+ this.setEndSeq(al.getHeight() - 1);
if (applet != null)
{
// get the width and height scaling factors if they were specified