import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
import jalview.ext.jmol.JalviewJmolBinding;
+import jalview.gui.IProgressIndicator;
import jalview.io.DataSourceType;
import jalview.structure.StructureSelectionManager;
public jalview.api.FeatureRenderer getFeatureRenderer(
AlignmentViewPanel alignment)
{
- AlignmentPanel alignPanel = (AlignmentPanel) alignment;
- if (alignPanel.av.isShowSequenceFeatures())
- {
- return alignPanel.getFeatureRenderer();
- }
- else
- {
- return null;
- }
+ return appletJmolBinding.ap.getFeatureRenderer();
}
@Override
{
try
{
- appletJmolBinding.ap.av.applet.getAppletContext().showDocument(
- new java.net.URL(url), "jmol");
+ appletJmolBinding.ap.av.applet.getAppletContext()
+ .showDocument(new java.net.URL(url), "jmol");
} catch (java.net.MalformedURLException ex)
{
}
// TODO Auto-generated method stub
return null;
}
+
+ @Override
+ protected IProgressIndicator getIProgressIndicator()
+ {
+ // no progress indicators on the applet
+ return null;
+ }
}