JAL-3390 first pass refactoring for JalviewJmolBinding.showStructures

[jalview.git] / src / jalview / appletgui / AppletJmolBinding.java

diff --git a/src/jalview/appletgui/AppletJmolBinding.java b/src/jalview/appletgui/AppletJmolBinding.java
index d5d53fb..f880eea 100644 (file)
--- a/src/jalview/appletgui/AppletJmolBinding.java
+++ b/src/jalview/appletgui/AppletJmolBinding.java
@@ -102,7 +102,7 @@ class AppletJmolBinding extends JalviewJmolBinding
   public void updateColours(Object source)
   {
     AlignmentPanel ap = (AlignmentPanel) source;
-    colourBySequence(ap);
+    updateStructureColours(ap);
   }
 
   @Override
@@ -173,14 +173,12 @@ class AppletJmolBinding extends JalviewJmolBinding
   @Override
   public int[] resizeInnerPanel(String data)
   {
-    // TODO Auto-generated method stub
     return null;
   }
 
   @Override
   public Map<String, Object> getJSpecViewProperty(String arg0)
   {
-    // TODO Auto-generated method stub
     return null;
   }
 }