javascript callback for selection, mousover, and functions for selection and highligh...

[jalview.git] / src / jalview / appletgui / RotatableCanvas.java

diff --git a/src/jalview/appletgui/RotatableCanvas.java b/src/jalview/appletgui/RotatableCanvas.java
index 4872aad..34db801 100755 (executable)
--- a/src/jalview/appletgui/RotatableCanvas.java
+++ b/src/jalview/appletgui/RotatableCanvas.java
@@ -514,11 +514,11 @@ public class RotatableCanvas extends Panel implements MouseListener,
 
     if (found != null)
     {
+      // TODO: applet PCA is not associatable with multi-panels - only parent view 
       if (av.getSelectionGroup() != null)
       {
         av.getSelectionGroup().addOrRemove(found, true);
         av.getSelectionGroup().setEndRes(av.alignment.getWidth() - 1);
-        PaintRefresher.Refresh(this, av.getSequenceSetId());
       }
       else
       {
@@ -527,6 +527,8 @@ public class RotatableCanvas extends Panel implements MouseListener,
         av.getSelectionGroup().setEndRes(av.alignment.getWidth() - 1);
 
       }
+      PaintRefresher.Refresh(this, av.getSequenceSetId());
+      av.sendSelection();
     }
     repaint();
   }