/*\r
* Jalview - A Sequence Alignment Editor and Viewer\r
- * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
*\r
* This program is free software; you can redistribute it and/or\r
* modify it under the terms of the GNU General Public License\r
{\r
g1.setColor(Color.blue);\r
g1.drawLine( (blockEnd - blockStart + 1) * av.charWidth - 1,\r
- startSeq + offset,\r
- (blockEnd - blockStart + 1) * av.charWidth - 1,\r
- startSeq + (endSeq - startSeq) * av.charHeight + offset);\r
+ 0 + offset,\r
+ (blockEnd - blockStart + 1) * av.charWidth - 1,\r
+ (endSeq - startSeq) * av.charHeight + offset);\r
}\r
\r
g1.translate( -screenY * av.charWidth, 0);\r
int ex = -1;\r
int groupIndex = -1;\r
\r
- if ( (group == null) && (group.getSize(false) > 0))\r
+ if ( (group == null) && (av.alignment.getGroups().size() > 0))\r
{\r
group = (SequenceGroup) av.alignment.getGroups().elementAt(0);\r
groupIndex = 0;\r