Merge branch 'develop' into features/JAL-2446NCList

[jalview.git] / src / jalview / appletgui / SeqCanvas.java

diff --git a/src/jalview/appletgui/SeqCanvas.java b/src/jalview/appletgui/SeqCanvas.java
index d4bf49a..faa2d42 100755 (executable)
--- a/src/jalview/appletgui/SeqCanvas.java
+++ b/src/jalview/appletgui/SeqCanvas.java
@@ -552,8 +552,8 @@ public class SeqCanvas extends Panel implements ViewportListenerI
     return annotations.adjustPanelHeight();
   }
 
-  private void drawPanel(Graphics g1, int startRes, int endRes,
-          int startSeq, int endSeq, int offset)
+  private void drawPanel(Graphics g1, final int startRes, final int endRes,
+          final int startSeq, final int endSeq, final int offset)
   {
 
     if (!av.hasHiddenColumns())
@@ -562,15 +562,15 @@ public class SeqCanvas extends Panel implements ViewportListenerI
     }
     else
     {
-
       int screenY = 0;
+      final int screenYMax = endRes - startRes;
       int blockStart = startRes;
       int blockEnd = endRes;
 
       if (av.hasHiddenColumns())
       {
         HiddenColumns hidden = av.getAlignment().getHiddenColumns();
-        for (int[] region : hidden.getHiddenColumnsCopyAsList())
+        for (int[] region : hidden.getHiddenColumnsCopy())
         {
           int hideStart = region[0];
           int hideEnd = region[1];
@@ -581,13 +581,22 @@ public class SeqCanvas extends Panel implements ViewportListenerI
             continue;
           }
 
-          blockEnd = hideStart - 1;
+          /*
+           * draw up to just before the next hidden region, or the end of
+           * the visible region, whichever comes first
+           */
+          blockEnd = Math.min(hideStart - 1, blockStart + screenYMax
+                  - screenY);
 
           g1.translate(screenY * avcharWidth, 0);
 
           draw(g1, blockStart, blockEnd, startSeq, endSeq, offset);
 
-          if (av.getShowHiddenMarkers())
+          /*
+           * draw the downline of the hidden column marker (ScalePanel draws the
+           * triangle on top) if we reached it
+           */
+          if (av.getShowHiddenMarkers() && blockEnd == hideStart - 1)
           {
             g1.setColor(Color.blue);
             g1.drawLine((blockEnd - blockStart + 1) * avcharWidth - 1,
@@ -600,14 +609,14 @@ public class SeqCanvas extends Panel implements ViewportListenerI
           screenY += blockEnd - blockStart + 1;
           blockStart = hideEnd + 1;
 
-          if (screenY > (endRes - startRes))
+          if (screenY > screenYMax)
           {
             // already rendered last block
             return;
           }
         }
       }
-      if (screenY <= (endRes - startRes))
+      if (screenY <= screenYMax)
       {
         // remaining visible region to render
         blockEnd = blockStart + (endRes - startRes) - screenY;
@@ -873,32 +882,44 @@ public class SeqCanvas extends Panel implements ViewportListenerI
   @Override
   public void propertyChange(PropertyChangeEvent evt)
   {
+    String eventName = evt.getPropertyName();
+
     if (!av.getWrapAlignment())
     {
-      if (evt.getPropertyName().equals("startres")
-              || evt.getPropertyName().equals("endres"))
+      int scrollX = 0;
+      if (eventName.equals(ViewportRanges.STARTRES))
       {
         // Make sure we're not trying to draw a panel
         // larger than the visible window
         ViewportRanges vpRanges = av.getRanges();
-        int scrollX = (int) evt.getNewValue() - (int) evt.getOldValue();
-        if (scrollX > vpRanges.getEndRes() - vpRanges.getStartRes())
+        scrollX = (int) evt.getNewValue() - (int) evt.getOldValue();
+        int range = vpRanges.getEndRes() - vpRanges.getStartRes();
+        if (scrollX > range)
         {
-          scrollX = vpRanges.getEndRes() - vpRanges.getStartRes();
+          scrollX = range;
         }
-        else if (scrollX < vpRanges.getStartRes() - vpRanges.getEndRes())
+        else if (scrollX < -range)
         {
-          scrollX = vpRanges.getStartRes() - vpRanges.getEndRes();
+          scrollX = -range;
         }
+      }
+
+      // Both scrolling and resizing change viewport ranges: scrolling changes
+      // both start and end points, but resize only changes end values.
+      // Here we only want to fastpaint on a scroll, with resize using a normal
+      // paint, so scroll events are identified as changes to the horizontal or
+      // vertical start value.
+      if (eventName.equals(ViewportRanges.STARTRES))
+      {
+        // scroll - startres and endres both change
         fastPaint(scrollX, 0);
       }
-      else if (evt.getPropertyName().equals("startseq")
-              || evt.getPropertyName().equals("endseq"))
+      else if (eventName.equals(ViewportRanges.STARTSEQ))
       {
+        // scroll
         fastPaint(0, (int) evt.getNewValue() - (int) evt.getOldValue());
       }
     }
-
   }
 
 }