Merge branch 'develop' into update_212_Dec_merge_with_21125_chamges

[jalview.git] / src / jalview / appletgui / SeqPanel.java

diff --git a/src/jalview/appletgui/SeqPanel.java b/src/jalview/appletgui/SeqPanel.java
index 5becbc1..dd68f88 100644 (file)
--- a/src/jalview/appletgui/SeqPanel.java
+++ b/src/jalview/appletgui/SeqPanel.java
@@ -132,8 +132,7 @@ public class SeqPanel extends Panel implements MouseMotionListener,
     if (editCommand != null && editCommand.getSize() > 0)
     {
       ap.alignFrame.addHistoryItem(editCommand);
-      av.firePropertyChange("alignment", null,
-              av.getAlignment().getSequences());
+      av.notifyAlignment();
     }
 
     startseq = -1;
@@ -743,7 +742,7 @@ public class SeqPanel extends Panel implements MouseMotionListener,
   }
 
   @Override
-  public void highlightSequence(SearchResultsI results)
+  public String highlightSequence(SearchResultsI results)
   {
     if (av.isFollowHighlight())
     {
@@ -760,7 +759,7 @@ public class SeqPanel extends Panel implements MouseMotionListener,
     }
     setStatusMessage(results);
     seqCanvas.highlightSearchResults(results);
-
+    return null;
   }
 
   @Override
@@ -907,7 +906,8 @@ public class SeqPanel extends Panel implements MouseMotionListener,
    */
   List<SequenceFeature> findFeaturesAtColumn(SequenceI sequence, int column)
   {
-    return seqCanvas.getFeatureRenderer().findFeaturesAtColumn(sequence, column);
+    return seqCanvas.getFeatureRenderer().findFeaturesAtColumn(sequence,
+            column);
   }
 
   Tooltip tooltip;
@@ -1195,9 +1195,9 @@ public class SeqPanel extends Panel implements MouseMotionListener,
         {
           if (sg.getSize() == av.getAlignment().getHeight())
           {
-            if ((av.hasHiddenColumns() && startres < av.getAlignment()
-                    .getHiddenColumns()
-                    .getNextHiddenBoundary(false, startres)))
+            if ((av.hasHiddenColumns()
+                    && startres < av.getAlignment().getHiddenColumns()
+                            .getNextHiddenBoundary(false, startres)))
             {
               endEditing();
               return;