reorganized JalviewJSApp (accidentally put that in jalview/api) and

[jalview.git] / src / jalview / bin / AppletParams.java

diff --git a/src/jalview/bin/AppletParams.java b/src/jalview/bin/AppletParams.java
index a6c87b1..3642985 100644 (file)
--- a/src/jalview/bin/AppletParams.java
+++ b/src/jalview/bin/AppletParams.java
@@ -17,8 +17,9 @@ import jalview.gui.Preferences;
 public class AppletParams extends HashMap<String, Object>
 {
 
-  private final static String[] params = { "alignpdbfiles",
-      Preferences.ANNOTATIONCOLOUR_MAX, Preferences.ANNOTATIONCOLOUR_MIN,
+  private final static String[] params = { 
+      "alignpdbfiles",
+      "ANNOTATIONCOLOUR_MAX", "ANNOTATIONCOLOUR_MIN",
       "annotations",
       "APPLICATION_URL", "automaticScrolling", "centrecolumnlabels",
       "debug", "defaultColour", "defaultColourNuc", "defaultColourProt",
@@ -184,7 +185,7 @@ public class AppletParams extends HashMap<String, Object>
     case "scorefile":
     case "sequence":
       // setting argName to null indicates that we want
-      // JalviewAppLoader to take care of this.
+      // JalviewJSApp to take care of this using getParameter or getParameterAsObject
       prefName = argName = null;
       value = resourcePath + value;
       break;
@@ -243,7 +244,7 @@ public class AppletParams extends HashMap<String, Object>
     // implemented; not tested:
 
     case "oninit":
-      prefName = null;
+      argName = null;
       break;
     case "annotations":
       value = resourcePath + value;