Use util toHexString
[jalview.git] / src / jalview / bin / Cache.java
index 1b5ba56..0927272 100755 (executable)
@@ -95,7 +95,7 @@ public class Cache
         propertiesFile = propsFile;
         if (propsFile == null)
         {
-          propertiesFile = System.getProperty("user.home") + "/.jalview_properties";
+          propertiesFile = System.getProperty("user.home") +File.separatorChar+".jalview_properties";
         }
 
         try
@@ -306,17 +306,16 @@ public class Cache
     public static boolean vamsasJarsPresent() {
       if (vamsasJarsArePresent==-1) {
         try {
-          if (jalview.jbgui.GDesktop.class.getClassLoader().loadClass("org.vamsas.client.VorbaId")!=null) {
-            jalview.bin.Cache.log.debug("Found Vamsas Classes (org.vamsas.client.VorbaId can be loaded)");
+          if (jalview.jbgui.GDesktop.class.getClassLoader().loadClass("uk.ac.vamsas.client.VorbaId")!=null) {
+            jalview.bin.Cache.log.debug("Found Vamsas Classes (uk.ac..vamsas.client.VorbaId can be loaded)");
             vamsasJarsArePresent=1;
-            Logger lvclient = Logger.getLogger("org.vamsas.client");
+            Logger lvclient = Logger.getLogger("uk.ac.vamsas");
             lvclient.setLevel(Level.toLevel(Cache.getDefault("logs.Vamsas.Level",
                 Level.INFO.toString())));
-            ConsoleAppender ap = new ConsoleAppender(new SimpleLayout(),
-                                                     "System.err");
+
             lvclient.addAppender(log.getAppender("JalviewLogger"));
             // Tell the user that debug is enabled
-            lvclient.debug("Jalview Vamsas Client Debugging Output Follows.");     
+            lvclient.debug("Jalview Vamsas Client Debugging Output Follows.");
           }
         } catch (Exception e) {
           vamsasJarsArePresent=0;