Merge branch 'patch/JAL-3700_JAL-3748_JAL-3763_for_2_11_1_3' into releases/Release_2_...

[jalview.git] / src / jalview / bin / Cache.java

diff --git a/src/jalview/bin/Cache.java b/src/jalview/bin/Cache.java
index 162ed3c..600d19c 100755 (executable)
--- a/src/jalview/bin/Cache.java
+++ b/src/jalview/bin/Cache.java
@@ -174,8 +174,8 @@ import jalview.ws.sifts.SiftsSettings;
  * when shading by annotation</li>
  * <li>ANNOTATIONCOLOUR_MAX (red) Shade used for maximum value of annotation
  * when shading by annotation</li>
- * <li>www.jalview.org (http://www.jalview.org) a property enabling all HTTP
- * requests to be redirected to a mirror of http://www.jalview.org</li>
+ * <li>www.jalview.org (https://www.jalview.org) a property enabling all HTTP
+ * requests to be redirected to a mirror of https://www.jalview.org</li>
  * <li>FIGURE_AUTOIDWIDTH (false) Expand the left hand column of an exported
  * alignment figure to accommodate even the longest sequence ID or annotation
  * label.</li>
@@ -432,7 +432,7 @@ public class Cache
                     DEFAULT_CACHE_THRESHOLD_IN_DAYS));
 
     IdOrgSettings.setUrl(getDefault("ID_ORG_HOSTURL",
-            "http://www.jalview.org/services/identifiers"));
+            "https://www.jalview.org/services/identifiers"));
     IdOrgSettings.setDownloadLocation(ID_ORG_FILE);
 
     StructureImportSettings.setDefaultStructureFileFormat(jalview.bin.Cache
@@ -483,7 +483,6 @@ public class Cache
             Properties remoteBuildProperties = new Properties();
             remoteBuildProperties.load(in);
             remoteVersion = remoteBuildProperties.getProperty("VERSION");
-            remoteBuildProperties.load(in);
           } catch (Exception ex)
           {
             System.out
@@ -496,7 +495,6 @@ public class Cache
                   orgtimeout);
 
           setProperty("LATEST_VERSION", remoteVersion);
-          System.out.println("LATEST_VERSION=" + remoteVersion);
         }
       }
 
@@ -1216,13 +1214,13 @@ public class Cache
     getdownDistDir = distDir;
   }
 
-  private static String getGetdownAppbase()
+  public static String getGetdownAppbase()
   {
     setGetdownAppbase();
     return getdownAppbase;
   }
 
-  private static String getAppbaseBuildProperties()
+  public static String getAppbaseBuildProperties()
   {
     String appbase = getGetdownAppbase();
     return appbase + "/" + getdownDistDir + "/build_properties";