JAL-629 added eps and imagemap. Added --output and --format with test. Adjusted...

[jalview.git] / src / jalview / bin / Jalview.java

diff --git a/src/jalview/bin/Jalview.java b/src/jalview/bin/Jalview.java
index 6c04be7..4c204fa 100755 (executable)
--- a/src/jalview/bin/Jalview.java
+++ b/src/jalview/bin/Jalview.java
@@ -320,6 +320,7 @@ public class Jalview
       {
         OutputStream devNull = new OutputStream()
         {
+
           @Override
           public void write(int b)
           {
@@ -380,7 +381,15 @@ public class Jalview
 
     try
     {
-      String logLevel = bootstrapArgs.contains(Arg.DEBUG) ? "DEBUG" : null;
+      String logLevel = null;
+      if (bootstrapArgs.contains(Arg.TRACE))
+      {
+        logLevel = "TRACE";
+      }
+      else if (bootstrapArgs.contains(Arg.DEBUG))
+      {
+        logLevel = "DEBUG";
+      }
       if (logLevel == null && !(bootstrapProperties == null))
       {
         logLevel = bootstrapProperties.getProperty(Cache.JALVIEWLOGLEVEL);