*/
public class Jalview
{
- // @formatter:off
- /**
- * find first query parameter (if any) that doesn't start with j2s
- * and set as space-delimited arguments to Jalview main
- *
- * @j2sNative
- * var hr = decodeURI(document.location.href);
- * var pos = hr.indexOf("?");
- * if (pos > 0)
- * {
- * q = hr.substring(pos+1);
- * args = q.split("&");
- * for (i = 0 ; i < args.length; i++)
- * {
- * arg1 = args[i];
- * if (!arg1.startsWith("j2s"))
- * {
- * thisApplet.__Info.args = arg1.split(" ");
- * break;
- * }
- * }
- * }
- */
- // @formatter:on
+ static
+ {
+ Platform.getURLCommandArguments();
+ }
+
+ // singleton instance of this class
- /*
- * singleton instance of this class
- */
private static Jalview instance;
private Desktop desktop;
/**
* Java only
*
- * @j2sNative
+ * @j2sIgnore
*/
{
// grab all the rights we can for the JVM
@SuppressWarnings("unused")
private static void setLogging()
{
+
+ /**
+ * @j2sIgnore
+ *
+ */
+ {
+ System.out.println("not in js");
+ }
+
// BH - for event debugging in JavaScript (Java mode only)
- if (!Platform.isJS())// !(/** @j2sNative true ||*/false))
+ if (!Platform.isJS())
/**
* Java only
*
- * @j2sNative
+ * @j2sIgnore
*/
{
Logger.getLogger("").setLevel(Level.ALL);
if (!Platform.isJS())
/**
- * ignore in JavaScript
+ * Java only
*
- * @j2sNative
+ * @j2sIgnore
*/
{
if (aparser.contains("help") || aparser.contains("h"))
/**
* Java only
*
- * @j2sNative
+ * @j2sIgnore
*/
{
desktop.startServiceDiscovery();
/**
* ignore in JavaScript -- can't just file existence - could load it?
*
- * @j2sNative
+ * @j2sIgnore
*/
{
if (!file.startsWith("http://") && !file.startsWith("https://"))
// And the user
// ////////////////////
- if (!Platform.isJS() && // /** @j2sNative false && */ // BH 2018
- !headless && file == null && vamsasImport == null
+ if (!Platform.isJS() && !headless && file == null
+ && vamsasImport == null
&& jalview.bin.Cache.getDefault("SHOW_STARTUP_FILE", true))
/**
* Java only
*
- * @j2sNative
+ * @j2sIgnore
*/
{
file = jalview.bin.Cache.getDefault("STARTUP_FILE",