JAL-2089 patch broken merge to master for Release 2.10.0b1

[jalview.git] / src / jalview / bin / Jalview.java

diff --git a/src/jalview/bin/Jalview.java b/src/jalview/bin/Jalview.java
index ce29f01..763b10b 100755 (executable)
--- a/src/jalview/bin/Jalview.java
+++ b/src/jalview/bin/Jalview.java
@@ -291,9 +291,10 @@ public class Jalview
     }
 
     /*
-     * configure 'full' SO model unless preferences say not to
+     * configure 'full' SO model if preferences say to, 
+     * else use the default (SO Lite)
      */
-    if (!Cache.getDefault("USE_SO_LITE", false))
+    if (Cache.getDefault("USE_FULL_SO", false))
     {
       SequenceOntologyFactory.setInstance(new SequenceOntology());
     }