{
if (debug)
{
- jalview.bin.Console.errPrintln("Selecting region using separator string '"
- + separator + "'");
+ jalview.bin.Console
+ .errPrintln("Selecting region using separator string '"
+ + separator + "'");
}
}
// deparse fields
}
if (debug)
{
- jalview.bin.Console.errPrintln("Range '" + cl + "' deparsed as [" + from
- + "," + to + "]");
+ jalview.bin.Console.errPrintln("Range '" + cl
+ + "' deparsed as [" + from + "," + to + "]");
}
}
else
}
else
{
- jalview.bin.Console.errPrintln("ERROR: Invalid Point selection '" + cl
- + "' deparsed as [" + r + "]");
+ jalview.bin.Console
+ .errPrintln("ERROR: Invalid Point selection '" + cl
+ + "' deparsed as [" + r + "]");
}
}
}
+ ((af == null) ? "All frames"
: "Just views for "
+ af.getAlignViewport().getSequenceSetId()));
- jalview.bin.Console.errPrintln("There are now " + javascriptListeners.size()
- + " listeners in total.");
+ jalview.bin.Console.errPrintln("There are now "
+ + javascriptListeners.size() + " listeners in total.");
}
}
+ ((af == null) ? "All frames"
: "Just views for "
+ af.getAlignViewport().getSequenceSetId()));
- jalview.bin.Console.errPrintln("There are now " + javascriptListeners.size()
- + " listeners in total.");
+ jalview.bin.Console.errPrintln("There are now "
+ + javascriptListeners.size() + " listeners in total.");
}
}
.addStructureViewerListener(mol);
if (debug)
{
- jalview.bin.Console.errPrintln("Added a javascript structure viewer listener '"
- + listener + "'");
- jalview.bin.Console.errPrintln("There are now " + javascriptListeners.size()
- + " listeners in total.");
+ jalview.bin.Console
+ .errPrintln("Added a javascript structure viewer listener '"
+ + listener + "'");
+ jalview.bin.Console.errPrintln("There are now "
+ + javascriptListeners.size() + " listeners in total.");
}
}
rprt = debug;
if (debug)
{
- jalview.bin.Console.errPrintln("Removed listener '" + listener + "'");
+ jalview.bin.Console
+ .errPrintln("Removed listener '" + listener + "'");
}
}
else
}
if (rprt)
{
- jalview.bin.Console.errPrintln("There are now " + javascriptListeners.size()
- + " listeners in total.");
+ jalview.bin.Console.errPrintln("There are now "
+ + javascriptListeners.size() + " listeners in total.");
}
}
}
} catch (NumberFormatException e)
{
- jalview.bin.Console.errPrintln("Ignoring invalid residue number string '"
- + pdbResNum + "'");
+ jalview.bin.Console
+ .errPrintln("Ignoring invalid residue number string '"
+ + pdbResNum + "'");
}
}
} catch (Exception ex)
{
- jalview.bin.Console.errPrintln("Couldn't parse integer arguments (topRow='"
- + topRow + "' and leftHandColumn='" + leftHandColumn
- + "')");
+ jalview.bin.Console
+ .errPrintln("Couldn't parse integer arguments (topRow='"
+ + topRow + "' and leftHandColumn='"
+ + leftHandColumn + "')");
ex.printStackTrace();
}
}
} catch (Exception ex)
{
- jalview.bin.Console.errPrintln("Couldn't parse integer arguments (topRow='"
- + topRow + "')");
+ jalview.bin.Console
+ .errPrintln("Couldn't parse integer arguments (topRow='"
+ + topRow + "')");
ex.printStackTrace();
}
JSObject scriptObject = JSObject.getWindow(this);
if (debug && scriptObject != null)
{
- jalview.bin.Console.errPrintln("Applet has Javascript callback support.");
+ jalview.bin.Console
+ .errPrintln("Applet has Javascript callback support.");
}
} catch (Exception ex)
separator = sep;
if (debug)
{
- jalview.bin.Console.errPrintln("Separator set to '" + separator + "'");
+ jalview.bin.Console
+ .errPrintln("Separator set to '" + separator + "'");
}
}
else
{
if (tries > 0)
{
- jalview.bin.Console.errPrintln("LiveConnect request thread going to sleep.");
+ jalview.bin.Console
+ .errPrintln("LiveConnect request thread going to sleep.");
}
try
{
;
if (tries++ > 0)
{
- jalview.bin.Console.errPrintln("LiveConnect request thread woken up.");
+ jalview.bin.Console
+ .errPrintln("LiveConnect request thread woken up.");
}
try
{
"Calling oninit callback '" + initjscallback + "'.");
} catch (Exception e)
{
- jalview.bin.Console.errPrintln("Exception when executing _oninit callback '"
- + initjscallback + "'.");
+ jalview.bin.Console
+ .errPrintln("Exception when executing _oninit callback '"
+ + initjscallback + "'.");
e.printStackTrace();
}
}
{
if (debug)
{
- jalview.bin.Console.errPrintln("Prepended document base '" + documentBase
- + "' to make: '" + withDocBase + "'");
+ jalview.bin.Console.errPrintln("Prepended document base '"
+ + documentBase + "' to make: '" + withDocBase + "'");
}
protocol = DataSourceType.URL;
return withDocBase;
return rtn;
} catch (Exception ex)
{
- jalview.bin.Console.outPrintln("Exception checking resources: " + f + " " + ex);
+ jalview.bin.Console.outPrintln(
+ "Exception checking resources: " + f + " " + ex);
return false;
}
}
this.separator = separator;
if (debug)
{
- jalview.bin.Console.errPrintln("Default Separator now: '" + separator + "'");
+ jalview.bin.Console
+ .errPrintln("Default Separator now: '" + separator + "'");
}
}
Color col = ColorUtils.parseColourString(colprop);
if (col == null)
{
- jalview.bin.Console.errPrintln("Couldn't parse '" + colprop + "' as a colour for "
- + colparam);
+ jalview.bin.Console.errPrintln("Couldn't parse '" + colprop
+ + "' as a colour for " + colparam);
}
return (col == null) ? defcolour : col;
}