+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.bin.argparser;
+import java.util.ArrayList;
import java.util.HashMap;
+import java.util.List;
import java.util.Map;
import jalview.bin.Console;
*/
public class SubVals
{
- private static int NOTSET = -1;
+ public static int NOTSET = -1;
private int index = NOTSET;
- private Map<String, String> subVals = null;
+ private Map<String, String> subValMap;
+
+ private static char SEPARATOR = ',';
- private static char SEPARATOR = ';';
+ private static char EQUALS = '=';
private String content = null;
- public SubVals(String item)
+ protected SubVals(SubVals sv, String c)
+ {
+ this(sv, c, true);
+ }
+
+ protected SubVals(SubVals sv, String c, boolean merge)
+ {
+ SubVals subvals;
+ if (merge)
+ {
+ SubVals vsv = new SubVals(c);
+ if (sv != null && sv.getSubValMap() != null)
+ {
+ for (String key : sv.getSubValMap().keySet())
+ {
+ vsv.put(key, sv.get(key));
+ }
+ }
+ if (sv != null && sv.getIndex() > 0)
+ {
+ vsv.index = sv.getIndex();
+ }
+ subvals = vsv;
+ }
+ else
+ {
+ // replace
+ subvals = sv;
+ }
+ if (subvals == null)
+ {
+ this.subValMap = new HashMap<>();
+ }
+ else
+ {
+ this.subValMap = subvals == null ? new HashMap<>()
+ : subvals.getSubValMap();
+ this.index = subvals.getIndex();
+ }
+ this.content = c;
+ }
+
+ protected SubVals(String item)
{
+ if (subValMap == null)
+ subValMap = new HashMap<>();
this.parseVals(item);
}
for (String subvalString : subvalsString
.split(Character.toString(SEPARATOR)))
{
- int equals = subvalString.indexOf('=');
+ int equals = subvalString.indexOf(EQUALS);
if (equals > -1)
{
- if (subVals == null)
- subVals = new HashMap<>();
- subVals.put(subvalString.substring(0, equals),
+ this.put(subvalString.substring(0, equals),
subvalString.substring(equals + 1));
}
else
setIndex = true;
} catch (NumberFormatException e)
{
- Console.warn("Failed to obtain subvalue or index from '" + item
- + "'. Setting index=0 and using content='" + content
- + "'.");
+ // store this non-numeric key as a "true" value
+ this.put(subvalString, "true");
}
}
}
if (!setIndex)
this.index = NOTSET;
+ else
+ Console.debug("SubVals from '" + subvalsString + "' has index "
+ + this.index + " set");
}
else
{
}
}
+ protected void put(String key, String val)
+ {
+ subValMap.put(key, val);
+ }
+
public boolean notSet()
{
// notSet is true if content present but nonsensical
- return index == NOTSET && subVals == null;
+ return index == NOTSET && (subValMap == null || subValMap.size() == 0);
+ }
+
+ public String getWithSubstitutions(ArgParser ap, String id, String key)
+ {
+ return ap.makeSubstitutions(subValMap.get(key), id);
}
public String get(String key)
{
- return subVals == null ? null : subVals.get(key);
+ return subValMap.get(key);
}
public boolean has(String key)
{
- return subVals == null ? false : subVals.containsKey(key);
+ return subValMap.containsKey(key);
}
public int getIndex()
return content;
}
+ protected Map<String, String> getSubValMap()
+ {
+ return subValMap;
+ }
+
public String toString()
{
- StringBuilder sb = new StringBuilder();
- if (subVals == null)
+ if (subValMap == null && getIndex() == NOTSET)
return "";
- for (Map.Entry<String, String> m : subVals.entrySet())
- {
- sb.append(m.getKey()).append('=').append(m.getValue()).append("\n");
- }
+
+ StringBuilder sb = new StringBuilder();
+ List<String> entries = new ArrayList<>();
+ subValMap.entrySet().stream().forEachOrdered(
+ m -> entries.add(m.getValue().equals("true") ? m.getKey()
+ : new StringBuilder().append(m.getKey()).append(EQUALS)
+ .append(m.getValue()).toString()));
+ if (getIndex() != NOTSET)
+ entries.add(Integer.toString(getIndex()));
+ sb.append('[');
+ sb.append(String.join(Character.toString(SEPARATOR), entries));
+ sb.append(']');
return sb.toString();
}
}
\ No newline at end of file