/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
- *
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
+ * This class was automatically generated with
+ * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
+ * Schema.
+ * $Id$
*/
+
package jalview.binding;
-// ---------------------------------/
-// - Imported classes and packages -/
-// ---------------------------------/
+//---------------------------------/
+//- Imported classes and packages -/
+//---------------------------------/
import org.exolab.castor.xml.Marshaller;
import org.exolab.castor.xml.Unmarshaller;
// -----------/
/**
- */
+ */
public void deleteCurrentTree()
{
this._has_currentTree = false;
}
/**
- */
+ */
public void deleteFitToWindow()
{
this._has_fitToWindow = false;
}
/**
- */
+ */
public void deleteFontSize()
{
this._has_fontSize = false;
}
/**
- */
+ */
public void deleteFontStyle()
{
this._has_fontStyle = false;
}
/**
- */
+ */
public void deleteHeight()
{
this._has_height = false;
}
/**
- */
+ */
public void deleteMarkUnlinked()
{
this._has_markUnlinked = false;
}
/**
- */
+ */
public void deleteShowBootstrap()
{
this._has_showBootstrap = false;
}
/**
- */
+ */
public void deleteShowDistances()
{
this._has_showDistances = false;
}
/**
- */
+ */
public void deleteThreshold()
{
this._has_threshold = false;
}
/**
- */
+ */
public void deleteWidth()
{
this._has_width = false;
}
/**
- */
+ */
public void deleteXpos()
{
this._has_xpos = false;
}
/**
- */
+ */
public void deleteYpos()
{
this._has_ypos = false;
*
* @param out
* @throws org.exolab.castor.xml.MarshalException
- * if object is null or if any SAXException is thrown during
- * marshaling
+ * if object is null or if any SAXException is thrown during
+ * marshaling
* @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the
- * schema
+ * if this object is an invalid instance according to the schema
*/
public void marshal(final java.io.Writer out)
throws org.exolab.castor.xml.MarshalException,
*
* @param handler
* @throws java.io.IOException
- * if an IOException occurs during marshaling
+ * if an IOException occurs during marshaling
* @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the
- * schema
+ * if this object is an invalid instance according to the schema
* @throws org.exolab.castor.xml.MarshalException
- * if object is null or if any SAXException is thrown during
- * marshaling
+ * if object is null or if any SAXException is thrown during
+ * marshaling
*/
public void marshal(final org.xml.sax.ContentHandler handler)
throws java.io.IOException,
* Sets the value of field 'currentTree'.
*
* @param currentTree
- * the value of field 'currentTree'.
+ * the value of field 'currentTree'.
*/
public void setCurrentTree(final boolean currentTree)
{
* Sets the value of field 'fitToWindow'.
*
* @param fitToWindow
- * the value of field 'fitToWindow'.
+ * the value of field 'fitToWindow'.
*/
public void setFitToWindow(final boolean fitToWindow)
{
* Sets the value of field 'fontName'.
*
* @param fontName
- * the value of field 'fontName'.
+ * the value of field 'fontName'.
*/
public void setFontName(final java.lang.String fontName)
{
* Sets the value of field 'fontSize'.
*
* @param fontSize
- * the value of field 'fontSize'.
+ * the value of field 'fontSize'.
*/
public void setFontSize(final int fontSize)
{
* Sets the value of field 'fontStyle'.
*
* @param fontStyle
- * the value of field 'fontStyle'.
+ * the value of field 'fontStyle'.
*/
public void setFontStyle(final int fontStyle)
{
* Sets the value of field 'height'.
*
* @param height
- * the value of field 'height'.
+ * the value of field 'height'.
*/
public void setHeight(final int height)
{
* Sets the value of field 'markUnlinked'.
*
* @param markUnlinked
- * the value of field 'markUnlinked'.
+ * the value of field 'markUnlinked'.
*/
public void setMarkUnlinked(final boolean markUnlinked)
{
* Sets the value of field 'newick'.
*
* @param newick
- * the value of field 'newick'.
+ * the value of field 'newick'.
*/
public void setNewick(final java.lang.String newick)
{
* Sets the value of field 'showBootstrap'.
*
* @param showBootstrap
- * the value of field 'showBootstrap'.
+ * the value of field 'showBootstrap'.
*/
public void setShowBootstrap(final boolean showBootstrap)
{
* Sets the value of field 'showDistances'.
*
* @param showDistances
- * the value of field 'showDistances'.
+ * the value of field 'showDistances'.
*/
public void setShowDistances(final boolean showDistances)
{
* Sets the value of field 'threshold'.
*
* @param threshold
- * the value of field 'threshold'.
+ * the value of field 'threshold'.
*/
public void setThreshold(final float threshold)
{
* Sets the value of field 'title'.
*
* @param title
- * the value of field 'title'.
+ * the value of field 'title'.
*/
public void setTitle(final java.lang.String title)
{
* Sets the value of field 'width'.
*
* @param width
- * the value of field 'width'.
+ * the value of field 'width'.
*/
public void setWidth(final int width)
{
* Sets the value of field 'xpos'.
*
* @param xpos
- * the value of field 'xpos'.
+ * the value of field 'xpos'.
*/
public void setXpos(final int xpos)
{
* Sets the value of field 'ypos'.
*
* @param ypos
- * the value of field 'ypos'.
+ * the value of field 'ypos'.
*/
public void setYpos(final int ypos)
{
*
* @param reader
* @throws org.exolab.castor.xml.MarshalException
- * if object is null or if any SAXException is thrown during
- * marshaling
+ * if object is null or if any SAXException is thrown during
+ * marshaling
* @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the
- * schema
+ * if this object is an invalid instance according to the schema
* @return the unmarshaled jalview.binding.Tree
*/
public static jalview.binding.Tree unmarshal(final java.io.Reader reader)
*
*
* @throws org.exolab.castor.xml.ValidationException
- * if this object is an invalid instance according to the
- * schema
+ * if this object is an invalid instance according to the schema
*/
public void validate() throws org.exolab.castor.xml.ValidationException
{
git://source.jalview.org / jalview.git / blobdiff