-
/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
-*/
-
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ */
package jalview.commands;
import jalview.datamodel.*;
{
boolean gapsInsertedBegin = false;
- public SlideSequencesCommand(String description,
- SequenceI[] seqsLeft,
- SequenceI[] seqsRight,
- int slideSize,
- char gapChar)
+ public SlideSequencesCommand(String description, SequenceI[] seqsLeft,
+ SequenceI[] seqsRight, int slideSize, char gapChar)
{
this.description = description;
if (!gapsInsertedBegin)
edits = new Edit[]
- { new Edit(DELETE_GAP, seqsLeft, 0, slideSize, gapChar)};
+ { new Edit(DELETE_GAP, seqsLeft, 0, slideSize, gapChar) };
else
edits = new Edit[]
- { new Edit(INSERT_GAP, seqsRight, 0, slideSize, gapChar)};
+ { new Edit(INSERT_GAP, seqsRight, 0, slideSize, gapChar) };
- performEdit(0,null);
+ performEdit(0, null);
}
public boolean getGapsInsertedBegin()
{
boolean same = false;
- if(command.edits[0].seqs.length==edits[0].seqs.length)
+ if (command.edits[0].seqs.length == edits[0].seqs.length)
{
same = true;
for (int i = 0; i < command.edits[0].seqs.length; i++)
}
}
- if(same)
+ if (same)
{
Edit[] temp = new Edit[command.edits.length + 1];
System.arraycopy(command.edits, 0, temp, 0, command.edits.length);
return same;
}
}
-
-