Merge branch 'develop' into features/JAL-2094_colourInterface

[jalview.git] / src / jalview / controller / AlignViewController.java

diff --git a/src/jalview/controller/AlignViewController.java b/src/jalview/controller/AlignViewController.java
index f508bc3..35a0ba7 100644 (file)
--- a/src/jalview/controller/AlignViewController.java
+++ b/src/jalview/controller/AlignViewController.java
@@ -25,6 +25,7 @@ import jalview.api.AlignViewControllerGuiI;
 import jalview.api.AlignViewControllerI;
 import jalview.api.AlignViewportI;
 import jalview.api.AlignmentViewPanel;
+import jalview.api.ColorI;
 import jalview.api.FeatureRenderer;
 import jalview.commands.OrderCommand;
 import jalview.datamodel.AlignmentI;
@@ -34,6 +35,7 @@ import jalview.datamodel.SequenceFeature;
 import jalview.datamodel.SequenceGroup;
 import jalview.datamodel.SequenceI;
 import jalview.io.FeaturesFile;
+import jalview.schemes.Colour;
 import jalview.util.MessageManager;
 
 import java.awt.Color;
@@ -112,10 +114,10 @@ public class AlignViewController implements AlignViewControllerI
         viewport.getAlignment().addGroup(gps[g]);
         Color col = new Color((int) (Math.random() * 255),
                 (int) (Math.random() * 255), (int) (Math.random() * 255));
-        col = col.brighter();
+        ColorI newcol = new Colour(col.brighter());
         for (SequenceI sq : gps[g].getSequences(null))
         {
-          viewport.setSequenceColour(sq, col);
+          viewport.setSequenceColour(sq, newcol);
         }
       }
       return true;