\r
public void setGapCharacter(char gc)\r
{\r
- char old = getGapCharacter();\r
gapCharacter = gc;\r
for (int i=0; i < sequences.size(); i++)\r
{\r
Sequence seq = (Sequence)sequences.elementAt(i);\r
- seq.sequence = seq.sequence.replace(old, gc);\r
+ seq.sequence = seq.sequence.replace('.', gc);\r
+ seq.sequence = seq.sequence.replace('-', gc);\r
}\r
}\r
\r