private static long counter = 0;
- private HiddenMarkovModel hmm;
-
/**
* If true, this annotations is calculated every edit, eg consensus, quality
* or conservation graphs
return graphMin < graphMax;
}
- /**
- * Returns the HMM associated with this annotation.
- *
- * @return
- */
- public HiddenMarkovModel getHMM()
- {
- return hmm;
- }
-
- /**
- * Sets the HMM associated with this annotation.
- *
- * @param hmm
- */
- public void setHMM(HiddenMarkovModel hmm)
- {
- this.hmm = hmm;
- }
}