*/\r
public SequenceI findName(String name);\r
\r
- /**\r
- * Finds sequence in alignment using full displayId as query.\r
- *\r
- * @param name displayId, ie <em>NAME/25-100</em>\r
- *\r
- * @return Sequence matching query, if found. If not found returns null.\r
- */\r
- public SequenceI findbyDisplayId(String name);\r
\r
/**\r
* Finds index of a given sequence in the alignment.\r
\r
public void setDataset(Alignment dataset);\r
\r
- public Provenance getProvenance();\r
-\r
- public void setProvenance(Provenance prov);\r
\r
}\r