import java.awt.*;\r
\r
\r
-public class Annotation {\r
+/**\r
+ * DOCUMENT ME!\r
+ *\r
+ * @author $author$\r
+ * @version $Revision$\r
+ */\r
+public class Annotation\r
+{\r
+ /** DOCUMENT ME!! */\r
public String displayCharacter = "";\r
+\r
+ /** DOCUMENT ME!! */\r
public String description = ""; // currently used as mouse over\r
+\r
+ /** DOCUMENT ME!! */\r
public char secondaryStructure = ' '; // recognises H and E\r
+\r
+ /** DOCUMENT ME!! */\r
public float value;\r
\r
// add visual cues here\r
+\r
+ /** DOCUMENT ME!! */\r
public Color colour = Color.black;\r
\r
- public Annotation(String displayChar, String desc, char ss, float val) {\r
+ /**\r
+ * Creates a new Annotation object.\r
+ *\r
+ * @param displayChar DOCUMENT ME!\r
+ * @param desc DOCUMENT ME!\r
+ * @param ss DOCUMENT ME!\r
+ * @param val DOCUMENT ME!\r
+ */\r
+ public Annotation(String displayChar, String desc, char ss, float val)\r
+ {\r
displayCharacter = displayChar;\r
description = desc;\r
secondaryStructure = ss;\r
value = val;\r
}\r
\r
+ /**\r
+ * Creates a new Annotation object.\r
+ *\r
+ * @param displayChar DOCUMENT ME!\r
+ * @param desc DOCUMENT ME!\r
+ * @param ss DOCUMENT ME!\r
+ * @param val DOCUMENT ME!\r
+ * @param colour DOCUMENT ME!\r
+ */\r
public Annotation(String displayChar, String desc, char ss, float val,\r
- Color colour) {\r
+ Color colour)\r
+ {\r
this(displayChar, desc, ss, val);\r
this.colour = colour;\r
}\r