Dont set group null hideCOls

[jalview.git] / src / jalview / datamodel / BinarySequence.java

diff --git a/src/jalview/datamodel/BinarySequence.java b/src/jalview/datamodel/BinarySequence.java
index 3cc6910..7d03404 100755 (executable)
--- a/src/jalview/datamodel/BinarySequence.java
+++ b/src/jalview/datamodel/BinarySequence.java
@@ -18,15 +18,8 @@
 */\r
 package jalview.datamodel;\r
 \r
-import jalview.analysis.PCA;\r
-\r
-import jalview.io.*;\r
-\r
-import jalview.jbgui.*;\r
-\r
 import jalview.schemes.*;\r
 \r
-import java.awt.*;\r
 \r
 \r
 /**\r
@@ -45,22 +38,9 @@ public class BinarySequence extends Sequence
      *\r
      * @param s DOCUMENT ME!\r
      */\r
-    public BinarySequence(SequenceI s)\r
-    {\r
-        super(s.getName(), s.getSequence(), s.getStart(), s.getEnd());\r
-    }\r
-\r
-    /**\r
-     * Creates a new BinarySequence object.\r
-     *\r
-     * @param name DOCUMENT ME!\r
-     * @param sequence DOCUMENT ME!\r
-     * @param start DOCUMENT ME!\r
-     * @param end DOCUMENT ME!\r
-     */\r
-    public BinarySequence(String name, String sequence, int start, int end)\r
+    public BinarySequence(String s)\r
     {\r
-        super(name, sequence, start, end);\r
+        super("", s, 0, s.length());\r
     }\r
 \r
     /**\r
@@ -175,13 +155,4 @@ public class BinarySequence extends Sequence
         return dbinary;\r
     }\r
 \r
-    /**\r
-     * DOCUMENT ME!\r
-     *\r
-     * @param rt DOCUMENT ME!\r
-     */\r
-    public static void printMemory(Runtime rt)\r
-    {\r
-        System.out.println("DEBUG: Free memory = " + rt.freeMemory()); // log.\r
-    }\r
 }\r