RepresentGroup count items

[jalview.git] / src / jalview / datamodel / BinarySequence.java

diff --git a/src/jalview/datamodel/BinarySequence.java b/src/jalview/datamodel/BinarySequence.java
index 423e401..af10e1d 100755 (executable)
--- a/src/jalview/datamodel/BinarySequence.java
+++ b/src/jalview/datamodel/BinarySequence.java
@@ -64,9 +64,7 @@ public class BinarySequence extends Sequence
 \r
             try\r
             {\r
-                aanum = ((Integer) ResidueProperties.getAAHash().get(getSequence()\r
-                                                                         .substring(i,\r
-                            i + 1))).intValue();\r
+                aanum = ResidueProperties.aaIndex[getSequence().charAt(i)];\r
             }\r
             catch (NullPointerException e)\r
             {\r
@@ -101,9 +99,7 @@ public class BinarySequence extends Sequence
 \r
             try\r
             {\r
-                aanum = ((Integer) ResidueProperties.getAAHash().get(getSequence()\r
-                                                                         .substring(i,\r
-                            i + 1))).intValue();\r
+                aanum = ResidueProperties.aaIndex[getSequence().charAt(i)];\r
             }\r
             catch (NullPointerException e)\r
             {\r