// viewmodel package
this.clear();
- if (ann_row.graph == AlignmentAnnotation.CUSTOMRENDERER && (filterParams
+ if (ann_row.graph == AlignmentAnnotation.CONTACT_MAP && (filterParams
.getThresholdType() == AnnotationFilterParameter.ThresholdType.ABOVE_THRESHOLD
|| filterParams
.getThresholdType() == AnnotationFilterParameter.ThresholdType.BELOW_THRESHOLD))
int cpos = ann_row.sequenceRef.findPosition(column) - 1;
ContactListI clist = ann_row.sequenceRef
.getContactListFor(ann_row, cpos);
- for (int row = column + 8,
- rowEnd = clist.getContactHeight(); row < rowEnd; row++)
+ for (int row = column + 8, rowEnd = clist
+ .getContactHeight(); row < rowEnd; row++)
{
if (filterParams
.getThresholdType() == AnnotationFilterParameter.ThresholdType.ABOVE_THRESHOLD